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Problema apagar tomcat, cpu 100%

https://forum.openkm.com/viewtopic.php?t=9267

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Problema apagar tomcat, cpu 100%

PostPosted:Fri Feb 15, 2013 7:43 am
by dix
Hola,

Estoy teniendo un problema con el openkm 6.2.2. Tengo hecho un script para hacer un backup todos los días con rsync para sincronizar el repositorio y mysqldump para la base de datos. El problema es que el no se apaga el openkm con la opción:
Code: Select all
/opt/openkm-6.2.0-community/tomcat/bin/catalina.sh stop
Sale el siguiente error:
Code: Select all
Tomcat did not stop in time. PID file was not removed.
No se porque pero la cpu del servidor está al 100% y tengo que matar el proceso a mano para iniciarlo después. En el log salen los siguientes errores:
Code: Select all
  2013-02-14 11:43:44,276 [http-bio-0.0.0.0-8080-exec-21] ERROR com.openkm.servlet.frontend.ConverterServlet - ClientAbortException:  java.net.SocketException: Broken pipe
        at org.apache.catalina.connector.OutputBuffer.realWriteBytes(OutputBuffer.java:388)
        at org.apache.tomcat.util.buf.ByteChunk.flushBuffer(ByteChunk.java:462)
        at org.apache.tomcat.util.buf.ByteChunk.append(ByteChunk.java:366)
        at org.apache.catalina.connector.OutputBuffer.writeBytes(OutputBuffer.java:413)
        at org.apache.catalina.connector.OutputBuffer.write(OutputBuffer.java:401)
        at org.apache.catalina.connector.CoyoteOutputStream.write(CoyoteOutputStream.java:91)
        at org.apache.commons.io.IOUtils.copyLarge(IOUtils.java:1026)
        at org.apache.commons.io.IOUtils.copy(IOUtils.java:999)
        at com.openkm.util.FileUtils.copy(FileUtils.java:178)
        at com.openkm.util.WebUtils.sendFile(WebUtils.java:316)
        at com.openkm.servlet.frontend.ConverterServlet.service(ConverterServlet.java:139)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:722)
        at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:305)
        at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:311)
        at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:116)
        at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:83)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:113)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:101)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:113)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:54)      
		at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:45)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:182)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:87)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:173)
        at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:346)
        at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:259)
        at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
        at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
        at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:225)
        at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:169)
        at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:472)
        at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:168)
        at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:98)
        at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:927)
        at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118)
        at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:407)
        at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:999)
        at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:565)
        at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:309)
        at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
        at java.lang.Thread.run(Thread.java:662)
Caused by: java.net.SocketException: Broken pipe
        at java.net.SocketOutputStream.socketWrite0(Native Method)
        at java.net.SocketOutputStream.socketWrite(SocketOutputStream.java:92)
        at java.net.SocketOutputStream.write(SocketOutputStream.java:136)
        at org.apache.coyote.http11.InternalOutputBuffer.realWriteBytes(InternalOutputBuffer.java:215)
        at org.apache.tomcat.util.buf.ByteChunk.flushBuffer(ByteChunk.java:462)
        at org.apache.tomcat.util.buf.ByteChunk.append(ByteChunk.java:366)
        at org.apache.coyote.http11.InternalOutputBuffer$OutputStreamOutputBuffer.doWrite(InternalOutputBuffer.java:240)
        at org.apache.coyote.http11.filters.IdentityOutputFilter.doWrite(IdentityOutputFilter.java:84)
        at org.apache.coyote.http11.AbstractOutputBuffer.doWrite(AbstractOutputBuffer.java:192)
        at org.apache.coyote.Response.doWrite(Response.java:504)
        at org.apache.catalina.connector.OutputBuffer.realWriteBytes(OutputBuffer.java:383)
        ... 50 more

2013-02-14 11:43:44,279 [http-bio-0.0.0.0-8080-exec-21] ERROR org.apache.catalina.core.ContainerBase.[Catalina].[localhost].[/OpenKM].[ConverterServ
let] - El Servlet.service() para el servlet [ConverterServlet] en el contexto con ruta [/OpenKM] lanzó la excepción [com.openkm.frontend.client.OKME
xception] con causa raíz com.openkm.frontend.client.OKMException
        at com.openkm.servlet.frontend.ConverterServlet.service(ConverterServlet.java:163)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:722)
        at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:305)
		at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:311)
        at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:116)
        at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:83)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:113)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:101)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:113)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:54)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:45)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:182)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:87)
        at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:323)
        at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:173)
        at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:346)
        at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:259)
        at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
        at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
        at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:225)
        at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:169)
        at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:472)
        at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:168)
        at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:98)
        at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:927)
        at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118)
        at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:407)
        at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:999)
        at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:565)
        at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:309)
        at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
        at java.lang.Thread.run(Thread.java:662)

2013-02-14 11:43:44,344 [http-bio-0.0.0.0-8080-exec-21] ERROR org.apache.catalina.core.ContainerBase.[Catalina].[localhost].[/OpenKM].[jsp] - El Ser
vlet.service() para servlet jsp lanzó una excepción
java.lang.IllegalStateException: getOutputStream() ya ha sido llamado para esta respuesta
        at org.apache.catalina.connector.Response.getWriter(Response.java:637)
        at org.apache.catalina.connector.ResponseFacade.getWriter(ResponseFacade.java:214)
        at javax.servlet.ServletResponseWrapper.getWriter(ServletResponseWrapper.java:105)
        at org.apache.jasper.runtime.JspWriterImpl.initOut(JspWriterImpl.java:125)
        at org.apache.jasper.runtime.JspWriterImpl.flushBuffer(JspWriterImpl.java:118)
        at org.apache.jasper.runtime.PageContextImpl.release(PageContextImpl.java:182)
        at org.apache.jasper.runtime.JspFactoryImpl.internalReleasePageContext(JspFactoryImpl.java:123)
        at org.apache.jasper.runtime.JspFactoryImpl.releasePageContext(JspFactoryImpl.java:80)
        at org.apache.jsp.error_jsp._jspService(error_jsp.java:168)
        at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:70)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:722)
        at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:432)
        at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:390)
        at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:334)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:722)
        at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:305)
        at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
        at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:684)
        at org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:593)
        at org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:530)
        at org.apache.catalina.core.StandardHostValve.custom(StandardHostValve.java:448)
        at org.apache.catalina.core.StandardHostValve.throwable(StandardHostValve.java:399)
        at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:191)
        at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:98)
        at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:927)
        at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118)
        at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:407)
        at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:999)
        at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:565)
        at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:309)
        at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
        at java.lang.Thread.run(Thread.java:662)
2013-02-14 11:43:44,345 [http-bio-0.0.0.0-8080-exec-21] ERROR org.apache.catalina.core.ContainerBase.[Catalina].[localhost] - Exception Processing E
rrorPage[exceptionType=java.lang.Exception, location=/error.jsp]
org.apache.jasper.JasperException: java.lang.IllegalStateException: getOutputStream() ya ha sido llamado para esta respuesta
        at org.apache.jasper.servlet.JspServletWrapper.handleJspException(JspServletWrapper.java:549)
        at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:465)
        at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:390)
        at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:334)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:722)
        at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:305)
        at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
        at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:684)
        at org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:593)
        at org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:530)
        at org.apache.catalina.core.StandardHostValve.custom(StandardHostValve.java:448)
        at org.apache.catalina.core.StandardHostValve.throwable(StandardHostValve.java:399)
        at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:191)
        at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:98)
        at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:927)
        at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118)
        at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:407)
        at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:999)
        at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:565)
        at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:309)
        at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
        at java.lang.Thread.run(Thread.java:662)
Caused by: java.lang.IllegalStateException: getOutputStream() ya ha sido llamado para esta respuesta
        at org.apache.catalina.connector.Response.getWriter(Response.java:637)
        at org.apache.catalina.connector.ResponseFacade.getWriter(ResponseFacade.java:214)
        at javax.servlet.ServletResponseWrapper.getWriter(ServletResponseWrapper.java:105)
        at org.apache.jasper.runtime.JspWriterImpl.initOut(JspWriterImpl.java:125)
        at org.apache.jasper.runtime.JspWriterImpl.flushBuffer(JspWriterImpl.java:118)
        at org.apache.jasper.runtime.PageContextImpl.release(PageContextImpl.java:182)
        at org.apache.jasper.runtime.JspFactoryImpl.internalReleasePageContext(JspFactoryImpl.java:123)
        at org.apache.jasper.runtime.JspFactoryImpl.releasePageContext(JspFactoryImpl.java:80)
        at org.apache.jsp.error_jsp._jspService(error_jsp.java:168)
        at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:70)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:722)
        at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:432)
        ... 21 more
¿Cuál es el problema? ¿Algún consejo?

Saludos.

Re: Problema apagar tomcat, cpu 100%

PostPosted:Fri Feb 15, 2013 5:48 pm
by jllort
Primero te aconsejaria instalar openkm como servicio tal y como se indica aqui:
http://wiki.openkm.com/index.php/Config ... at_service

Parece que tienes un proceso pillado - thread - que esta convirtiendo un fichero y que no ha terminado, razon por la que el tomcat se resiste a parar. Tienes algun fichero excel o parecido que sea muy grande, con muchas celdas etc...

Lo del 100% de cpu no es malo, a veces la aplicación esta indexando y es normal que varios procesadores esten al 100% otra cosa es que tengas un proceso pillado ( en este caso de conversion ) que te consuma cpu sin mas.

Que características de hardware tienes ?

Re: Problema apagar tomcat, cpu 100%

PostPosted:Mon Feb 18, 2013 8:24 am
by dix
El openkm ya lo tenía creado como servicio.

Lo que pasa es que en el log no se ve ningún archivo que me indique que hay algún error de indexación o de extracción de texto. Lo de la cpu es normal que esté al 100% cuando se está indexando de forma puntual pero no continuamente (que es como funciona en mi servidor a veces). El servidor es un Dell PowerEdge R510 dedicado exclusivamente a esta función.

La historia es que no sé como detectar qué es lo que está causando que ese thread se quede colgado y no me permita apagar el openkm.

Re: Problema apagar tomcat, cpu 100%

PostPosted:Wed Feb 20, 2013 11:45 am
by jllort
Tendras que debugar la maquina virtual: http://wiki.openkm.com/index.php/Profiling_OpenKM
All times are UTC
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